Yellow Physarum polycephalum slime mold growing on vegetation, often mistaken for a fungus
Left: a slime mold (Physarum polycephalum) spreading across agar. Right: fungal mycelium colonizing a similar surface. They look superficially similar, but their biology is fundamentally different.

The classification mistake that lasted 200 years

When European naturalists first studied slime molds in the 18th century, the classification seemed obvious. Here were organisms that grew on rotting wood, produced spore-bearing structures, and looked vaguely mushroom-like in their fruiting stage. They were clearly fungi.

This view persisted through the entire 19th century and well into the 20th. Slime molds were studied by mycologists, catalogued in fungal herbaria, and described in mycological journals. It wasn't until molecular biology tools became available in the 1970s and 1980s that the truth became undeniable: slime molds are no more closely related to fungi than they are to humans.

Let that sink in. On the tree of life, the evolutionary distance between a slime mold and a mushroom is roughly the same as the distance between a slime mold and a person.

Where they sit on the tree of life

Classification levelSlime molds (Myxomycetes)Fungi
DomainEukaryotaEukaryota
SupergroupAmoebozoaOpisthokonta
Closest relativesAmoebasAnimals (yes, really)
Class/PhylumMyxogastria (within Amoebozoa)Multiple phyla (Ascomycota, Basidiomycota, etc.)
Number of known species~1,000~150,000 (estimated 2-5 million total)

The key insight is the "Supergroup" row. Slime molds belong to Amoebozoa, a group of amoeba-like organisms. Fungi belong to Opisthokonta, which also includes all animals. Fungi are more closely related to you than they are to the slime mold on a rotting log. This is not a minor taxonomic detail; it represents over a billion years of independent evolution.

Cell structure: fundamentally different

The most basic biological differences between slime molds and fungi are visible at the cellular level:

FeatureSlime mold (Physarum)Fungi
Cell wallAbsent in the active plasmodium stage (cell membrane only)Always present; made of chitin
Cell organizationSingle giant cell (plasmodium) with millions of nuclei sharing one cytoplasmFilamentous; composed of thread-like hyphae divided into cells by cross-walls (septa)
MovementActively moves via cytoplasmic streaming and amoeboid locomotionGrows in one direction by extending hyphal tips; cannot relocate
CytoplasmFreely flowing; visible shuttle streamingCompartmentalized within individual hyphal cells
NucleiMillions of nuclei, all genetically identical, in one shared cellOne or a few nuclei per hyphal cell; some species have genetically different nuclei in the same mycelium (heterokaryosis)

The absence of a cell wall in the active stage is particularly significant. Fungi always have cell walls, and their walls are made of chitin (the same material found in insect exoskeletons). Slime mold plasmodia have no wall at all. They are essentially a naked mass of flowing cytoplasm enclosed only by a cell membrane. This is why slime molds feel wet and gelatinous while most fungi feel firm or woody.

Feeding: engulfing vs. absorbing

This is perhaps the most fundamental biological difference, and it's the one that tells the deepest evolutionary story.

How fungi eat

Fungi are absorptive heterotrophs. They secrete digestive enzymes outside their bodies, breaking down organic matter externally, and then absorb the dissolved nutrients through their cell walls. A mushroom growing on a dead tree is literally dissolving the wood around it and drinking the result. Fungi never engulf or "swallow" food.

How slime molds eat

Slime molds are phagotrophic. They eat by engulfing food particles whole, in a process called phagocytosis. When Physarum polycephalum encounters a bacterium or yeast cell, it flows around it, encloses it in a membrane-bound pocket (a food vacuole), and digests it internally. This is exactly how an amoeba eats. It is nothing like how a fungus eats.

The feeding test

If you're ever unsure whether something is a slime mold or a fungus, consider what it's growing on. Fungi grow into their food source, sending hyphae deep into wood or soil. Slime molds grow across surfaces, engulfing bacteria and particles as they go. A slime mold on a log is hunting on the surface, not digesting the log itself. For more details, see how slime mold eats.

Reproduction: similar-looking, entirely different

The reproductive structures of slime molds and fungi look superficially similar (both produce spore-bearing structures on stalks), which is the main reason they were historically confused. But the underlying biology is completely different.

FeatureSlime moldFungi
Spore-bearing structureSporangium: entire organism transforms into fruiting structuresFruiting body (mushroom, bracket, etc.): produced by the mycelium, which continues to live
Spore productionMeiosis within sporangia produces haploid sporesVaries: meiosis in basidia (Basidiomycota) or asci (Ascomycota)
Spore germinationProduces amoeba-like cell or flagellated cellProduces a hypha (filament)
Sexual system720+ mating types (in Physarum)Typically 2 mating types, sometimes more
After sporulationThe plasmodium is consumed; it "dies" to reproduceThe mycelium survives and continues growing

The fact that both groups produce spore-bearing structures is a case of convergent evolution: two unrelated lineages arriving at similar solutions to the same problem (airborne spore dispersal). The structures look similar because physics and aerodynamics favor certain shapes for launching tiny particles into the air, not because the organisms share a common ancestor that made spores.

For the complete Physarum reproductive cycle, see our article on slime mold reproduction.

Movement: one can, one can't

This is the difference that's most obvious to anyone observing both organisms:

  • Slime molds move. The plasmodium of Physarum polycephalum crawls across surfaces at speeds of up to 1-4 cm per hour. It actively explores its environment, moves toward food, retreats from light, and navigates around obstacles. You can watch it move in real-time if you're patient, or in stunning time-lapse videos.
  • Fungi do not move. A fungal mycelium grows by extending the tips of its hyphae. Growth is directional, and fungi can "grow toward" food sources by extending hyphae preferentially in certain directions. But a fungus cannot pick up and relocate. Once a hypha is laid down, it stays where it is.

The mechanism behind slime mold movement is cytoplasmic streaming: rhythmic contractions of the tube network push cytoplasm in coordinated waves, generating the force that drives locomotion. Fungi have nothing equivalent.

Ecological roles: overlapping niches, different methods

Despite their biological differences, slime molds and fungi occupy some of the same ecological spaces:

Ecological functionSlime mold contributionFungal contribution
DecompositionMinor direct role; feeds on microbes that decompose organic matterMajor role; primary decomposers of wood, leaves, and other plant material
Nutrient cyclingRedistributes nutrients by transporting them through its networkBreaks down complex molecules into simpler forms accessible to plants
Microbial population controlSignificant; consumes large numbers of bacteria and yeastSome fungi parasitize bacteria, but this is not their primary role
Food webEaten by beetles, slugs, mites, and nematodesEaten by a vast range of animals (humans included)
Spore dispersalWind, water, invertebratesWind, water, animals, active launch mechanisms

An important distinction: fungi are the primary decomposers in most ecosystems. They produce enzymes that break down cellulose, lignin, and other tough plant materials. Slime molds do not decompose wood or plant matter directly. Instead, they feed on the microorganisms that do the decomposing. Ecologically, slime molds are more like predators that patrol the decomposition zone, while fungi are the demolition crew.

Why the confusion lasted so long

The historical misclassification of slime molds as fungi was not simply a mistake. It was a reasonable conclusion given the available evidence, for several reasons:

  1. They grow in the same places. Both are found on rotting wood, leaf litter, and damp forest floors.
  2. They produce similar-looking spore structures. Without molecular tools, the convergent evolution of sporangia was impossible to distinguish from shared ancestry.
  3. The active stage is rarely observed. Most naturalists encountered slime molds only in their sporulating stage (which looks fungal), not their plasmodial stage (which looks amoeboid). The bright yellow, crawling plasmodium is ephemeral and hidden in dark, moist microhabitats.
  4. Taxonomy was morphology-based. Before DNA sequencing, organisms were classified by what they looked like. Spore-bearing structures on rotting wood looked like fungi, so they were classified as fungi.
  5. Institutional inertia. Slime molds were studied by mycology departments, published in mycology journals, and stored in fungal herbaria. Reclassifying them required overcoming decades of organizational habit.

The reclassification came gradually through the 1970s and 1980s as molecular phylogenetics revealed the true evolutionary relationships. By the 1990s, no serious biologist still considered slime molds to be fungi. But the popular confusion persists to this day, partly because many field guides and general-audience texts still discuss them in the context of mycology.

So what is a slime mold?

Slime molds belong to the Amoebozoa, a group defined by their amoeba-like cell movement. Physarum polycephalum is, at its core, a giant amoeba. It engulfs food, flows across surfaces, and has no cell wall. The fact that it produces spore-bearing structures is a remarkable evolutionary innovation, but it doesn't make it a fungus any more than a bat's wings make it a bird. For the full picture, see what is slime mold.

Quick-reference comparison chart

FeatureSlime moldFungus
Kingdom/SupergroupAmoebozoaFungi (Opisthokonta)
Cell wallNone (active stage)Chitin
FeedingEngulfs food (phagocytosis)Absorbs dissolved nutrients
MovementYes, active locomotionNo (only growth)
Body formSingle multinucleated cellFilamentous mycelium
Decomposition roleIndirect (eats decomposers)Direct (breaks down plant material)
Mating types720+ (Physarum)Typically 2
SporesYesYes
Closest animal relative?AmoebaAnimals (including humans)

The next time someone calls slime mold a fungus, you'll know better. And you'll understand why the distinction matters: these two groups represent completely independent experiments in how to make a living as a decomposer-zone organism on planet Earth.